Atoms to ecosystems

Reverse phosphorylation

Genetic code

See for review: Let there be anti-entropic light (1)   Squid are hyper-editors when it comes to RNA This is a great summary of what is currently known about anti-entropic light and nutrient-dependent RNA-mediated pheromone-controlled cell type differentiation. Excerpt: “During…
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RNA-mediated “repurposing” is nutrient-dependent and pheromone-controlled

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 Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system Excerpt: The fast-spreading strain AR2F had acquired an additional point mutation in the σ54-dependent EBP gene ntrC, which alters an amino acid (R442C) within the DNA binding domain…
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From 3-D to epigenetically-effected 4-D genome make-up

terrarium eco system

Discoveries in 3-D Genome Make-Up and Genetic Changes: Clarification of differences amidst chromosome pairs and how gene expression is effected by chromosome folding Excerpt: “…offers a useful guide for future studies of the epigenome’s function in our evolution and diseases…
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An epigenetic trap (the prequel)

terrarium eco system

See also: An epigenetic trap (the sequel) Excerpt: “Support for the link from one epigenetic trap to cell type differentiation was included in the molecular epigenetics section of our 1996 review, which detailed how RNA-mediated chromatin remodeling occurs.” My comment:…
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Imagining that data historically supports evolutionary theory

human-evolution

1) Arguments in the evo-devo debate: say it with flowers! Abstract excerpt: A key question in evolutionary developmental biology is how DNA sequence changes have directed the evolution of morphological diversity. The widely accepted view was that morphological changes resulted…
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Atheism: Arrogant, useless, and divisive ignorance

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Scientific Seeker Stuart Kauffman on Free Will, God, ESP and Other Mysteries By John Horgan | February 4, 2015 Excerpt: Horgan: What do you make of the antipathy toward religion expressed by Richard Dawkins and other “New Atheists?” Kauffman: … moral…
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The anti-entropic force of “Nature”

Physics

Exploring the Epigenome A National Institutes of Health-funded consortium publishes 111 reference maps of DNA and histone marks. By Jenny Rood | February 18, 2015 Excerpt:  “All our cells have a copy of the same book, but they’re all reading…
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Nutritional epigenetics, exercise, and immune system integrity

terrarium eco system

Anti-inflammatory mechanism of dieting and fasting revealed Summary: Researchers have found that a compound produced by the body when dieting or fasting can block a part of the immune system involved in several inflammatory disorders such as type 2 diabetes,…
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Military combat training to fight disease (2)

human-evolution

See: Military combat training to fight disease In the quantum world, the future affects the past Excerpt 1) “It’s not clear why in the real world, the world made up of many particles, time only goes forward and entropy always…
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Theoretical physics and molecular biology

terrarium eco system

Astrophysical phenomenology meets pheromone-ology: Slugs that “eat light” Theoretical physics and molecular biology can be compared in the context of their explanatory power. For example (with my emphasis): Theoretical physics (2015): Firewall Phenomenology with Astrophysical Neutrinos Abstract: One of the…
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